Index A | C | D | F | G | I | L | M | N | O | P | R | S | T | V A alpha_beta_default (RadiobiologyConfig attribute) alpha_beta_map (RadiobiologyConfig attribute) analyse() (PatientPlan method) AnalysisResults (class in PyPlanAnalysis.plan) C CalcNTCP() (AnalysisResults method) compute_2d_histogram() (in module PyPlanAnalysis.metrics) compute_cumulative_histogram() (in module PyPlanAnalysis.metrics) compute_dvh_metrics() (in module PyPlanAnalysis.metrics) compute_eqd2 (MetricConfig attribute) compute_geud (MetricConfig attribute) compute_let_metrics() (in module PyPlanAnalysis.metrics) compute_NTCP() (NTCPModelBase method) compute_rbe_dose() (in module PyPlanAnalysis.rbe) compute_roi_volume_comparison() (in module PyPlanAnalysis.io) compute_x() (NTCPModelBase method) contour_area_signed() (in module PyPlanAnalysis.io) ctv_name (NTCPConfig attribute) D default_ntcp_params_path() (in module PyPlanAnalysis.NTCP) define_side() (NTCPModelBase method) dlvh_data (AnalysisResults attribute) dlvh_dose_bins (MetricConfig attribute) dlvh_let_bins (MetricConfig attribute) dvh_bins (MetricConfig attribute) dvh_data (AnalysisResults attribute) dx (MetricConfig attribute) F find_dicom_files() (in module PyPlanAnalysis.io) fixed_rbe (RBEConfig attribute) from_folder() (PatientPlan class method) G get_all_structure_names() (in module PyPlanAnalysis.io) get_alpha_beta() (RadiobiologyConfig method) get_fractional_mask_on_grid() (in module PyPlanAnalysis.io) get_geud_a() (RadiobiologyConfig method) get_grid_geometry() (in module PyPlanAnalysis.io) get_roi_center_of_mass() (in module PyPlanAnalysis.io) get_structure_mask_on_grid() (in module PyPlanAnalysis.io) geud_a_default (RadiobiologyConfig attribute) geud_a_map (RadiobiologyConfig attribute) I impl_fn (NTCPModelBase attribute) L LET_thr (MetricConfig attribute) load() (PatientPlan method) load_ct_series() (in module PyPlanAnalysis.io) load_dose_grid() (in module PyPlanAnalysis.io) lvh_bins (MetricConfig attribute) lvh_data (AnalysisResults attribute) lx (MetricConfig attribute) M MetricConfig (class in PyPlanAnalysis.metrics) metrics_df (AnalysisResults attribute) models (NTCPConfig attribute) (RBEConfig attribute) module PyPlanAnalysis.io PyPlanAnalysis.metrics PyPlanAnalysis.NTCP PyPlanAnalysis.plan PyPlanAnalysis.plots PyPlanAnalysis.rbe N New_grid (MetricConfig attribute) npNan() (in module PyPlanAnalysis.NTCP) NTCP__Alopecia_G1_12m__1() (in module PyPlanAnalysis.NTCP) NTCP__Alopecia_G1_12m__2() (in module PyPlanAnalysis.NTCP) NTCP__Alopecia_G1_24m__1() (in module PyPlanAnalysis.NTCP) NTCP__Alopecia_G1_24m__2() (in module PyPlanAnalysis.NTCP) NTCP__Alopecia_G1_acute() (in module PyPlanAnalysis.NTCP) NTCP__Alopecia_G2_acute() (in module PyPlanAnalysis.NTCP) NTCP__Blindness_5y() (in module PyPlanAnalysis.NTCP) NTCP__BrainNecrosis_5y() (in module PyPlanAnalysis.NTCP) NTCP__CataractRequiringIntervention_5y() (in module PyPlanAnalysis.NTCP) NTCP__DelayedRecall_1_5y() (in module PyPlanAnalysis.NTCP) NTCP__EndocrineDysfunction_late() (in module PyPlanAnalysis.NTCP) NTCP__Erythema_G1_acute() (in module PyPlanAnalysis.NTCP) NTCP__Erythema_G2_acute() (in module PyPlanAnalysis.NTCP) NTCP__Fatigue_G1_24m() (in module PyPlanAnalysis.NTCP) NTCP__Fatigue_G1_acute() (in module PyPlanAnalysis.NTCP) NTCP__HearingImpairment_G1_12m__1() (in module PyPlanAnalysis.NTCP) NTCP__HearingImpairment_G1_12m__2() (in module PyPlanAnalysis.NTCP) NTCP__HearingImpairment_G1_24m() (in module PyPlanAnalysis.NTCP) NTCP__HearingLoss_late() (in module PyPlanAnalysis.NTCP) NTCP__MemoryImpairment_G1_12m() (in module PyPlanAnalysis.NTCP) NTCP__MemoryImpairment_G1_24m() (in module PyPlanAnalysis.NTCP) NTCP__MemoryImpairment_G2_12m() (in module PyPlanAnalysis.NTCP) NTCP__OcularToxicity_G2_acute() (in module PyPlanAnalysis.NTCP) NTCP__TemporalLobeInjury_5y() (in module PyPlanAnalysis.NTCP) NTCP__Tinnitus_G2_late() (in module PyPlanAnalysis.NTCP) NTCPConfig (class in PyPlanAnalysis.NTCP) NTCPModelBase (class in PyPlanAnalysis.NTCP) numberOfVariables (NTCPModelBase attribute) O OAR_name (NTCPModelBase attribute) P parameterNames (NTCPModelBase attribute) patient_id (AnalysisResults attribute) PatientPlan (class in PyPlanAnalysis.plan) plot_cumulative_histogram() (in module PyPlanAnalysis.plots) plot_dlvh() (AnalysisResults method) plot_dlvh_2d() (in module PyPlanAnalysis.plots) plot_dlvh_3d() (in module PyPlanAnalysis.plots) plot_dvh() (AnalysisResults method) plot_dvh_comparison() (in module PyPlanAnalysis.plots) plot_lvh() (AnalysisResults method) prismatoid_volume() (in module PyPlanAnalysis.io) PyPlanAnalysis.io module PyPlanAnalysis.metrics module PyPlanAnalysis.NTCP module PyPlanAnalysis.plan module PyPlanAnalysis.plots module PyPlanAnalysis.rbe module R RadiobiologyConfig (class in PyPlanAnalysis.metrics) rasterize_supersampled() (in module PyPlanAnalysis.io) rbe_carabe() (in module PyPlanAnalysis.rbe) rbe_fixed() (in module PyPlanAnalysis.rbe) rbe_linear() (in module PyPlanAnalysis.rbe) rbe_mcnamara() (in module PyPlanAnalysis.rbe) rbe_wedenberg() (in module PyPlanAnalysis.rbe) RBEConfig (class in PyPlanAnalysis.rbe) resample_dose_on_ct() (in module PyPlanAnalysis.io) resample_dose_to_new_grid() (in module PyPlanAnalysis.io) roi_overrides (NTCPConfig attribute) S save_all() (AnalysisResults method) save_figure() (in module PyPlanAnalysis.plots) save_figures_to_pdf() (in module PyPlanAnalysis.plots) side (NTCPModelBase attribute) smooth_contour() (in module PyPlanAnalysis.io) structure_names (PatientPlan property) T to_csv() (AnalysisResults method) to_excel() (AnalysisResults method) V voxel_volume_cc (PatientPlan property) vx (MetricConfig attribute)